Outbreak investigation using outbreaker2

/ [lectures]   / #reconstruction #outbreaker2 

This short lecture gives a primer on some methodological aspects of outbreak reconstruction using outbreaker2.


Click on the image below to access the slides:

click there for slides

About this document


  • Thibaut Jombart: initial version

  • Finlay Campbell: figure on *outbreaker2*’s contact model

Contributions are welcome via pull requests. The source file can be found here.

License: CC-BY Copyright: Thibaut Jombart, 2017